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University of Nevada, Reno
University of
Nevada, Reno

Dr. Ardythe A. McCracken
Foundation Professor of Biology, Emeritus

Cell Biology - Protein Secretion and Quality Control

University of Nevada
Biology Department m/s 314
Reno NV 89557

email Dr. Ardythe A. McCracken

Office phone
775-784-6188
FAX number
775-784-1302

Dr. McCracken received her Ph.D. in Molecular Biology-Genetics in 1981 with Arnold Clark at the University of Delaware and performed her postdoctoral studies in protein biochemistry and secretion with Jerry Brown at the University of Colorado Health Science Center; she joined the Biology Department in 1987.
Dr. McCracken is not accepting new graduate students, but rather is acting as student and faculty mentor to the department, visiting professor at other Universities, and scientific advisor to foundations and agencies.


Research:
Dr. McCracken’s research interests include the molecular biology of intracellular protein trafficking and the underlying common principles and mechanisms, with emphasis on the secretory pathway. Her recent work has focused on understanding a quality control process that ensures nascent proteins are correctly folded, processed, and completely assembled before they exit the endoplasmic reticulum (ER) for further transport through the secretory pathway. Most proteins that fail to pass this checkpoint are degraded. Dr. McCracken and her colleagues discovered the process by which these aberrant and unassembled secretory proteins are removed from the ER, and named it ER-associated protein degradation, or ERAD. A unique aspect of ERAD is that ER-lumenal protein substrates are exported to the cytoplasm for degradation by the proteasome complex. This discovery has far reaching significance in that it reveals a cellular function for a retrograde protein transporter in the ER, a mechanism implicated in the delivery of cytotoxic proteins to the cytoplasm of the cell, and a transport pathway exploited by the human cytomegalovirus to mask its presence in infected cells. In addition, Dr. McCracken’s group recently uncovered additional quality control pathways that appear to function as overflow paths to the lysosome (vacuole) for the degradation of aggregated protein. This discovery provides a possible explanation for sporadic liver disease associated with deficiencies of at least two plasma proteins and expands our understanding of the breadth and complexity of cellular protein quality control.


Recent Publications:
Scott CM, Kruse KB, Schmidt BZ, Perlmutter DH, McCracken AA, Brodsky JL. 2007. ADD66, a Gene Involved in the Endoplasmic Reticulum Associated Degradation (ERAD) of Alpha-1-Antitrypsin-Z in Yeast, Facilitates Proteasome Activity and Assembly. Mol Biol Cell. Jul 18; [Epub ahead of print]

Palmer EA, Kruse KB, Fewell SW, Buchanan SM, Brodsky JL, McCracken AA. 2003. Differential requirements of novel A1PiZ degradation deficient (ADD) genes in ER-associated protein degradation. J Cell Sci. 116:2361-73

McCracken AA, and Brodsky, JL. 2003. Evolving questions and paradigm shifts in endoplasmic-reticulum-associated degradation (ERAD). BioEssays 25:868-877

Lee RJ, Liu CW, Harty C, McCracken AA, Latterich M, Romisch K, DeMartino GN, Thomas PJ, Brodsky JL. 2004. Uncoupling retro-translocation and degradation in the ER-associated degradation of a soluble protein. EMBO J. 23(11):2206-15

Lee, RJ, McCracken, AA, and Brodsky, JL. 2005. Reconstitution of ER Associated Degradation (ERAD) using Yeast Membranes and Cytosol. Methods Molecular Biology 301:175-184

Kruse, KB, Brodsky, JB, and McCracken, AA. 2006. Characterization of an ERAD gene as VPS30/ATG6 reveals two alternative and functionally distinct protein quality control pathways: Molecular Biology Cell, 17:203-12

McCracken, AA and Brodsky, JL. 2006. Recognition and delivery of ERAD substrates and alternative paths to cell survival. In Dislocation and Degradation of Proteins from the Endoplasmic Reticulum, Current Topics in Micro and Immunology, 300:17–40 Springer-Verlag Berlin Heidelberg

Kruse, KB, Brodsky, JB, and McCracken, AA. 2006. Autophagy: an ER protein quality control process. Autophagy, 2:135-137

Kruse KB, Dear A, Kaltenbrun KB, Crum BE, George PM, Brennan SO, and McCracken AA. 2006. Mutant fibrinogen cleared from the ER via ERAD and autophagy: an explanation for liver disease. American J Pathology, 168:1299-1308

Links:
Dr. McCracken Fulbright Scholarship announcement.
Dr. McCracken at Northern Caribbean University as Fulbright Scholar